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Lecture Schedule and homework due dates == // == Honors == // == Announcements == // == Grade postings and Family Educational Rights and Privacy Act == // == Grading and course policy == // == General course information == // == Instructors == // == TAs == // == Study Groups
Terms students are expected to know from previous courses.
Other Home pages: EEB --//-- MCB --//-- Biochem --//-- U of A Genetics Graduate program --//-- BLC --//-- UBRP --//-- Register here for a U of A e-mail account
A copy of the course text (Griffiths, A., et. al., An introduction to genetic analysis) is now on reserve. The call number is YMRP 213
Problem sets and their solutions are posted as pdf (adobe acrobat files). Most recent browsers launch these files directly, but some of you with older browsers will have to search the net for the free pdf reader for your particular system. Note that the screen output from some pdf files can look rather odd, but they print up just fine.
Old class handouts can be picked up outside of BSW 211 for up to about a week
after they were issued. All handouts are posted here, but in pdf (Adobe Acrobat) format. Many browsers have plugs-ins to read such files. Hence, if you are more than one week late in picking up old handouts, its up to you to find a pdf browser. Good luck!!
Note that some pdf files look funny on the screen (equations often don't align), but they print out fine.
Problem sets and their solutions.
Lecture Time and Place: M,W,F 11am 204 CBS; F. 2pm 100 BSE
Reading Material: Genetic Analysis (6th Edition) by Griffiths et al. is required. The Student Companion to Genetic Analysis, which gives detailed answers to the book problems is optional, but students have found it very helpful. Extra readings may be assigned and these will be put on reserve in Main Library.
It is a violation of the federal Family Educational
Rights and Privacy Act (FERPA) to publicly post student grades that are
identified by the student's name, institutional student identification
number, or social security number without first having obtained the
student's written permission. This regulation applies to Web sites and grade sheets left with office staff as well as to the more traditional posting sites such as bulletin boards and office doors.
Accordingly, attacked to the first homework assignment will be a form for you to sign if you wish to have your scores for homework, tests, etc. posted (on the website and class bulletin boards). The method of posting with the the last four digits of your SS number. Not signing this form has absolutely no effect on your grade, and it is completely voluntary.
If you do not sign this form, to ensure your privacy, I will only give out your scores if you visit me during office hours, after showing me a picture ID. To protect your privacy, no scores will be given over the phone or e-mail (unless you have signed the posting consent form).
In the very rare event that you have to miss class on Friday,
you can also fax in your problem sets (621-9190), but to receive any credit:
Exams: There are three 100 point midterms (Friday, 1 October; Friday, 5 November; Monday, 6 December) and a 200 point final (Wednesday, 15 December). Material for exams will come from readings, problem sets, and lectures.
Grading: Material for exams will come from readings and
lecture. Problem sets must handed in at the start of the 11 am
Fri. class (unless otherwise noted on the syllabus) on dates indicated.
Problem sets handed in late receive zero credit.
Your final grade will be computed two different ways, and you will
receive the HIGHER of the two. One method uses the percentage of the total
highest score, with 90% (and up) of the highest total score = A, 80-89% = B, 70-79% = C, 60-69% = D. (If you are worried, we round up from the nearest 0.5, so that 89.500 = 90, but 89.499 = 89). The advantage of using the total percentage is that (in theory) the entire class can get an A. The second method uses normal (z) scores, which depend on the overall distribution of test scores. The advantage of using z-scores is that very good (or very bad) exam performances are more highly weighted. You can track your current grade status via your SS number using the Grade tracker .
Regrading: Request for regrading of any material (exam
or problem set) must be made in writing to the grader using a
special form (available from Dr. Walsh or the grader) within 1
week of receiving the grade. The complete exam or
problem set may be regraded, and a higher or lower score may result.
Class policy on missed exams: Attendance is required for
lecture and problem solving sessions. The Friday 2 p.m. meeting
in 100 BSE is mandatory. Students will receive no credit, a zero,
for problem sets and exams that are missed. NO MAKE UP EXAMS OR
PROBLEM SETS WILL BE GIVEN.
Procedure to Resolve Disputes: First see grader; then Dr.
Walsh
Class policy on study groups: You are encouraged to form
study groups to discuss lecture material and problems sets. If
you study and discuss problem sets in a study group put the names
of all members of your study group on the first page of your answers.
You will NOT be penalized for this. HOWEVER, DO NOT COPY ANSWERS
FROM EACH OTHER. Discuss the problems in your study group and
then go home and write up your answers alone.
Class policy on "academic integrity": Your academic
work (exams and problem sets) must be your own; do not copy answers
to problem sets or anything else; cheating and plagiarism will
not be tolerated on exams or problem sets. If you are caught,
any combination of the following will occur (UA Code of Academic
Integrity): a zero grade will be assigned for the work; course
grade dropped one letter grade; course grade of F; disciplinary
probation from University; suspension from the University; notation
"Declared guilty of violation of the Code of Academic Integrity"
put on student's permanent record.
Meeting time and place : Monday 2-3, BSW 212 (ROOM CHANGE)
Honors handout (pdf file)
Summary for total homework points
Monday 23 August
Lecture 1
Introduction to Probability theory 1
Wednesday 25 August
Lecture 2
Introduction to Probability theory 2: distributions
Friday (AM) 27 August
Lectures 3/4
Mendelian analysis 1
Monday 30 August
Lecture 5
Chromosomal Theory of Heredity
Wednesday 1 September
Lecture 6
Extensions of Mendelian analysis
Friday 3 September
Lectures 7 and 8
Sex: Chromosomes, Determination, and Linkage
Monday 6 September
Labor day: Holiday
Wednesday 8 September
Lecture 9
Genetics of Color Vision
Friday 10 September
Lectures 10 and 11
Linkage I and II
Monday 13 September
Lecture 12
3-point test cross
Wednesday 15 September
Lecture 13
Genetic maps and mapping functions
Friday 17 September
Lectures 14 and 15
Mapping disease genes
Monday 20 September
Lecture 16
Fungal Genetics
Wednesday 22 September
Lecture 17
Mutation
Friday 24 September
Lectures 18 and 19
Changes in Chromosome Structure
Monday 27 September
Lecture 20
Changes in Chromosome Number
Wednesday 29 September
Review for Exam one
Friday 1 October
EXAM ONE
Monday 4 October
Lecture 21
Human genetic disease
Wednesday 6 October
Lectures 22 and 23
Cloning human disease genes I
Friday 8 October
Lectures 22 and 23
Cloning human disease genes II
Friday 8 October (PM)
Review Problem Set
Monday 11 October
Lecture 25
Using cloned genes for disease screening
Wednesday 13 October
Lecture 26
Using cloned genes for gene therapy
Friday 15 October
Lecture 27
Using cloned genes to understand molecular defects
Friday 15 October (PM)
Review Problem Set
Monday 18 October
Lecture 29
Using mice as a model organism
Wednesday 20 October
Lecture 30
Using flies as a model organism
Friday 22 October (AM)
Lectures 31 and 32
Using worms as a model organism
Monday 25 October
Lecture 33
Using yeast as a model organism
Wednesday 27 October
Lecture 34
Designing mutant hunts
Friday 29 October (AM)
Lectures 35 and 36
Mutant analysis I
Monday 1 November
Lecture 37
Mutant analysis II
Wednesday 3 November
Review for Exam 2
Friday 5 November
EXAM TWO
Monday 8 November
Lecture 38
Extranuclear inheritance
Wednesday 10 November
Lectures 39 and 40
Recombination and Gene Conversion II
Friday 12 November
Lectures 39 and 40
Recombination and Gene Conversion II
Monday 15 November
Lecture 41
Population Genetics I: Variation, Hardy-Weinberg and Linkage Disequilibrium
Wednesday 17 November
Lecture 42
Population Genetics II: Mutation, Inbreeding, and Genetic Drift
Friday 19 November
Lecture 43
Population Genetics III: Natural selection
Monday 22 November
Lecture 44
Population Genetics IV: Interaction of Selection with Mutation and Drift
Wednesday 24 November
Lecture 45
Molecular Evolution and the Neutral Theory
Friday 26 November
Thanksgiving Holiday
Monday 29 November
Lecture 46
Quantitative Genetics I: Basic statistical issues
Wednesday 1 December
Lecture 47
Quantitative Genetics II: Resemblance between relatives
Friday 3 December
Lecture 48
Quantitative Genetics III: Evolution and Selection Response
Monday 6 December
EXAM THREE
Wednesday 8 December
Review for Final
Wednesday 15 December; 11 AM CBS 204
FINAL
Problem sets: Problem sets must handed in at the start of the 11 am Fri. class (unless otherwise noted in the syllabus). Problem sets handed in late will receive zero credit.
Individuals who do not turn in either of the first two problem sets can be dropped from the course without notice
Material Points Lecture exam 1 100 Lecture exam 2 100 Lecture exam 3 100 12 lecture problem sets 120 Final Exam 200
Assignments